Survival-associated meQTLs across different cancer types
We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.
|
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
log-rank test p-value
|
Sample size
|
Median survival time AA
|
Median survival time Aa
|
Median survival time aa
|
|
|---|---|---|---|---|---|---|---|---|---|
| PAAD | rs11083603 | chr19:41557290 | G/A | 4.06E-5 | 170 | 16.6 | 14.6 | 8.23 | KM Plot |
| PAAD | rs11102777 | chr1:114852826 | G/C | 0 | 174 | 0.4 | 15.27 | 15.57 | KM Plot |
| PAAD | rs11102779 | chr1:114854400 | T/C | 0 | 174 | 0.4 | 15.63 | 15.57 | KM Plot |
| PAAD | rs11111983 | chr12:104690947 | T/G | 1.12E-12 | 176 | 1.37 | 15.8 | 15.53 | KM Plot |
| PAAD | rs11112632 | chr12:106041887 | A/G | 4.55E-5 | 178 | 2.2 | 16.03 | 15.37 | KM Plot |
| PAAD | rs111253838 | chr19:5169739 | G/A | 7.81E-6 | 178 | 15.57 | 15.35 | 3.67 | KM Plot |
| PAAD | rs111296786 | chr8:72554645 | G/A | 6.92E-8 | 176 | 15.77 | 12.63 | 3.17 | KM Plot |
| PAAD | rs111314111 | chr1:227569838 | C/T | 6.96E-5 | 176 | 15.4 | 16.45 | 3.9 | KM Plot |
| PAAD | rs111396854 | chr11:125580947 | C/T | 0.000112 | 177 | 16.08 | 14.18 | 5.03 | KM Plot |
| PAAD | rs111465856 | chr2:70484865 | G/C | 0 | 178 | 15.37 | 17.4 | 1.03 | KM Plot |
| PAAD | rs111555040 | chr21:44068259 | T/G | 1.28E-12 | 173 | 15.48 | 16.15 | 1.37 | KM Plot |
| PAAD | rs111569022 | chr8:72547156 | C/T | 4.49E-8 | 174 | 15.77 | 12.18 | 3.17 | KM Plot |
| PAAD | rs111573905 | chr2:70471961 | T/C | 0 | 176 | 15.3 | 17.4 | 1.03 | KM Plot |
| PAAD | rs111667788 | chr16:74682752 | G/A | 2.4E-8 | 174 | 15.87 | 13.12 | 3.17 | KM Plot |
| PAAD | rs111680617 | chr2:34509893 | G/A | 6.84E-5 | 174 | 15.43 | 15.57 | 4.58 | KM Plot |